# Suggested further readings 

## Representational Similarity Analysis (RSA)

- Kriegeskorte, N., Mur, M., & Bandettini, P. A. (2008). [Representational similarity analysis-connecting the branches of systems neuroscience](https://www.frontiersin.org/articles/10.3389/neuro.06.004.2008/full). Frontiers in systems neuroscience, 2, 249.

- Kriegeskorte, N., & Diedrichsen, J. (2019). [Peeling the onion of brain representations](https://doi.org/10.1146/annurev-neuro-080317-061906). Annual Review of Neuroscience, 42(1), 407–432.

## Two-factor bootstrap

- Heiko H Schütt, Alexander D Kipnis, Jörn Diedrichsen, Nikolaus Kriegeskorte (2023) [Statistical inference on representational geometries](https://elifesciences.org/articles/82566). eLife 12:e82566.

## RSA Toolbox

- Nili, H., Wingfield, C., Walther, A., Su, L., Marslen-Wilson, W., & Kriegeskorte, N. (2014). [A toolbox for representational similarity analysis](https://doi.org/10.1371/journal.pcbi.1003553). PLoS Computational Biology, 10(4).

- [RSA Toolbox documentation](https://rsatoolbox.readthedocs.io/en/stable/index.html)

## Natural Scenes Dataset and Algonauts

- Allen, E.J., St-Yves, G., Wu, Y., Breedlove, J.L., Prince, J.S., Dowdle, L.T., Nau, M., Caron, B., Pestilli, F., Charest, I., Hutchinson, J.B., Naselaris, T.*, Kay, K.* [A massive 7T fMRI dataset to bridge cognitive neuroscience and artificial intelligence](https://www.nature.com/articles/s41593-021-00962-x). Nature Neuroscience (2021).

- Gifford AT, Lahner B, Saba-Sadiya S, Vilas MG, Lascelles A, Oliva A, Kay K, Roig G, Cichy RM. 2023. [The Algonauts Project 2023 Challenge: How the Human Brain Makes Sense of Natural Scenes](https://doi.org/10.48550/arXiv.2301.03198). arXiv preprint, arXiv:2301.03198.

## AlexNet

- Krizhevsky, A., Sutskever, I., & Hinton, G. E. (2012). [Imagenet classification with deep convolutional neural networks](https://proceedings.neurips.cc/paper_files/paper/2012/file/c399862d3b9d6b76c8436e924a68c45b-Paper.pdf). Advances in neural information processing systems, 25.

## Statistical Analysis

- Allefeld, C., & Haynes, J.-D. (2014). [Searchlight-based multi-voxel pattern analysis of fMRI by cross-validated Manova](https://doi.org/10.1016/j.neuroimage.2013.11.043). NeuroImage, 89, 345–357.

- Walther, A., Nili, H., Ejaz, N., Alink, A., Kriegeskorte, N., & Diedrichsen, J. (2016). [Reliability of dissimilarity measures for multi-voxel pattern analysis](https://doi.org/10.1016/j.neuroimage.2015.12.012). NeuroImage, 137, 188–200.

## Computation as transformation of representational geometries

- Williams AH, Kunz E, Kornblith S, Linderman S. (2021). [Generalized shape metrics on neural representations](https://arxiv.org/abs/2110.14739). Advances in Neural Information Processing Systems.
- Lange RD, Kwok D, Matelsky J, Wang X, Rolnick DS, Kording KP. (2022). [Neural networks as paths through the space of representations](https://arxiv.org/abs/2206.10999). arXiv:2206.10999.